Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase n-terminal domain-containing protein | CKY39_RS13590 | Not Available | Positive | 2958165 - 2958605 | 16099.1 |
| maoc family dehydratase | CKY39_RS13595 | Not Available | Positive | 2958620 - 2959036 | 15195.5 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS13600 | Not Available | Positive | 2959074 - 2959904 | 28705.6 |
| enoyl-coa hydratase/isomerase family protein | CKY39_RS13605 | Not Available | Positive | 2959906 - 2960694 | 27444.9 |
| duf2167 domain-containing protein | CKY39_RS13610 | Not Available | Negative | 2960716 - 2961633 | 32290.4 |
| cupin domain-containing protein | CKY39_RS13615 | Not Available | Negative | 2961714 - 2962136 | 15885.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34285 | Not Available | Positive | 2962242 - 2962421 | 6275.62 |
| srpbcc family protein | CKY39_RS13625 | Not Available | Positive | 2962531 - 2963052 | 19533.9 |
| rna polymerase sigma factor | CKY39_RS13630 | Not Available | Positive | 2963049 - 2964323 | 46287.3 |
| ycii family protein | CKY39_RS13635 | Not Available | Positive | 2964396 - 2964776 | 13855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
