Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3488 domain-containing protein | CKY39_RS34280 | Not Available | Negative | 2929329 - 2929814 | 18007.8 |
| duf58 domain-containing protein | CKY39_RS13490 | Not Available | Negative | 2929828 - 2930808 | 35416.9 |
| aaa family atpase | CKY39_RS13495 | Not Available | Negative | 2930805 - 2931725 | 32878.9 |
| histone deacetylase family protein | CKY39_RS13500 | Not Available | Positive | 2931815 - 2932768 | 34969.6 |
| mechanosensitive ion channel family protein | CKY39_RS13505 | Not Available | Positive | 2932808 - 2934097 | 46568.7 |
| electron transfer flavoprotein subunit beta/fixa family protein | CKY39_RS13510 | Not Available | Positive | 2934234 - 2934983 | 26947.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CKY39_RS13515 | Not Available | Positive | 2934997 - 2935929 | 31286.1 |
| acyl-coa dehydrogenase | CKY39_RS13520 | Not Available | Positive | 2936016 - 2937806 | 63587.9 |
| nad(p)h-dependent flavin oxidoreductase | CKY39_RS13525 | Not Available | Positive | 2937887 - 2938849 | 33640.3 |
| acyltransferase family protein | CKY39_RS13530 | Not Available | Positive | 2938924 - 2940018 | 38839.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
