Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| btrh n-terminal domain-containing protein | CKY39_RS13445 | Not Available | Positive | 2921094 - 2922074 | 36122.2 |
| abc transporter atp-binding protein | CKY39_RS13450 | Not Available | Positive | 2922074 - 2922982 | 32336.2 |
| abc transporter permease | CKY39_RS13455 | Not Available | Positive | 2922992 - 2924149 | 40921.3 |
| acyl carrier protein | CKY39_RS13460 | Not Available | Positive | 2924146 - 2924424 | 9868.83 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | CKY39_RS13465 | Not Available | Positive | 2924421 - 2925494 | 36462.9 |
| hypothetical protein | CKY39_RS13470 | Not Available | Positive | 2925491 - 2926012 | 18964.9 |
| n-methyl-d-aspartate receptor nmdar2c subunit | CKY39_RS13475 | Not Available | Negative | 2925991 - 2926611 | 23364.5 |
| lytic murein transglycosylase b | CKY39_RS13480 | Not Available | Negative | 2926616 - 2927719 | 39762.6 |
| transglutaminase-like domain-containing protein | CKY39_RS34270 | Not Available | Negative | 2927785 - 2928702 | 33576.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34275 | Not Available | Negative | 2928856 - 2929374 | 18823.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
