Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase | CKY39_RS13395 | Not Available | Positive | 2910742 - 2912418 | 61249.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS13400 | Not Available | Positive | 2912418 - 2913490 | 38664.7 |
| abc transporter atp-binding protein | CKY39_RS13405 | Not Available | Positive | 2913493 - 2914563 | 38793.9 |
| carbohydrate abc transporter permease | CKY39_RS13410 | Not Available | Positive | 2914560 - 2915450 | 33081.9 |
| carbohydrate abc transporter permease | CKY39_RS13415 | Not Available | Positive | 2915447 - 2916259 | 30641.9 |
| duf2160 domain-containing protein | CKY39_RS13420 | Not Available | Positive | 2916272 - 2916580 | 11502.6 |
| abc transporter substrate-binding protein | CKY39_RS13425 | Not Available | Positive | 2916670 - 2918400 | 64007.2 |
| dialkylrecorsinol condensing enzyme | CKY39_RS13430 | Not Available | Positive | 2918569 - 2919573 | 36438.9 |
| beta-ketoacyl-acp synthase iii | CKY39_RS13435 | Not Available | Positive | 2919563 - 2920699 | 41228.5 |
| hypothetical protein | CKY39_RS13440 | Not Available | Positive | 2920702 - 2921097 | 14543.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
