Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | CKY39_RS13345 | Not Available | Negative | 2893804 - 2896542 | 98611.2 |
| duf2126 domain-containing protein | CKY39_RS13350 | Not Available | Negative | 2896620 - 2900120 | 130465.0 |
| dna internalization-related competence protein comec/rec2 | CKY39_RS13355 | Not Available | Positive | 2900242 - 2902710 | 88546.7 |
| circularly permuted type 2 atp-grasp protein | CKY39_RS13360 | Not Available | Positive | 2902809 - 2904305 | 55796.0 |
| alpha-e domain-containing protein | CKY39_RS13365 | Not Available | Positive | 2904317 - 2905273 | 36658.4 |
| duf1566 domain-containing protein | CKY39_RS13370 | Not Available | Positive | 2905398 - 2905988 | 21255.0 |
| sulfatase-like hydrolase/transferase | CKY39_RS13375 | Not Available | Negative | 2906002 - 2907654 | 60977.6 |
| sh3 domain-containing protein | CKY39_RS13380 | Not Available | Positive | 2907856 - 2908320 | 17601.5 |
| glycerol kinase glpk | CKY39_RS13385 | Not Available | Negative | 2908333 - 2909829 | 53424.8 |
| deor/glpr family dna-binding transcription regulator | CKY39_RS13390 | Not Available | Negative | 2909849 - 2910619 | 27839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
