Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CKY39_RS00225 | Not Available | Positive | 47709 - 49694 | 72560.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CKY39_RS00230 | Not Available | Positive | 49691 - 50335 | 22427.3 |
| lyse family transporter | CKY39_RS00235 | Not Available | Positive | 50450 - 51064 | 21547.2 |
| para family protein | CKY39_RS00240 | Not Available | Positive | 51094 - 52014 | 32482.3 |
| rbbp9/yden family alpha/beta hydrolase | CKY39_RS00245 | Not Available | Positive | 52063 - 52608 | 20124.8 |
| parb/repb/spo0j family partition protein | CKY39_RS00250 | Not Available | Positive | 52608 - 53561 | 34226.3 |
| csgg/hfab family protein | CKY39_RS00255 | Not Available | Positive | 53693 - 54592 | 30194.0 |
| fad-binding oxidoreductase | CKY39_RS00260 | Not Available | Negative | 54680 - 56104 | 50499.4 |
| dinb family protein | CKY39_RS00265 | Not Available | Positive | 56181 - 56681 | 18322.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CKY39_RS00270 | Not Available | Positive | 56696 - 57295 | 21633.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
