Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | CKY39_RS13150 | Not Available | Positive | 2853154 - 2853690 | 19309.9 |
| metallophosphoesterase family protein | CKY39_RS13155 | Not Available | Negative | 2853702 - 2854451 | 26888.8 |
| hypothetical protein | CKY39_RS13160 | Not Available | Negative | 2854738 - 2856432 | 63916.1 |
| amino acid abc transporter permease | CKY39_RS13165 | Not Available | Positive | 2856567 - 2857238 | 24855.9 |
| amino acid abc transporter permease | CKY39_RS13170 | Not Available | Positive | 2857270 - 2857923 | 23620.5 |
| transporter substrate-binding domain-containing protein | CKY39_RS13175 | Not Available | Positive | 2857980 - 2858777 | 28185.1 |
| amino acid abc transporter atp-binding protein | CKY39_RS13180 | Not Available | Positive | 2858807 - 2859562 | 27851.1 |
| sugar phosphate isomerase/epimerase family protein | CKY39_RS13185 | Not Available | Positive | 2859562 - 2860305 | 26568.9 |
| sugar kinase | CKY39_RS13190 | Not Available | Positive | 2860316 - 2861269 | 33676.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS13195 | Not Available | Positive | 2861269 - 2862225 | 34019.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
