Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CKY39_RS13095 | Not Available | Negative | 2839881 - 2841107 | 43121.5 |
| mfs transporter | CKY39_RS13100 | Not Available | Negative | 2841239 - 2842435 | 40389.2 |
| serine hydrolase domain-containing protein | CKY39_RS13105 | Not Available | Negative | 2842428 - 2843621 | 42088.1 |
| lysr family transcriptional regulator | CKY39_RS13110 | Not Available | Positive | 2843712 - 2844623 | 32870.7 |
| dna topoisomerase iv subunit b | CKY39_RS13115 | Not Available | Positive | 2844697 - 2846685 | 71982.8 |
| lytic transglycosylase domain-containing protein | CKY39_RS13120 | Not Available | Positive | 2846719 - 2847654 | 33157.8 |
| dna topoisomerase iv subunit a | CKY39_RS13125 | Not Available | Positive | 2847742 - 2850138 | 86268.4 |
| hypothetical protein | CKY39_RS13130 | Not Available | Positive | 2850138 - 2850335 | 7424.16 |
| abc transporter substrate-binding protein | CKY39_RS13135 | Not Available | Negative | 2850358 - 2851311 | 33308.5 |
| mbl fold metallo-hydrolase | CKY39_RS13145 | Not Available | Negative | 2851872 - 2852999 | 41687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
