Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | CKY39_RS13050 | Not Available | Positive | 2832926 - 2833426 | 17373.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CKY39_RS13055 | Not Available | Negative | 2833497 - 2834021 | 18868.4 |
| jmjc domain-containing protein | CKY39_RS13060 | Not Available | Positive | 2834036 - 2835178 | 42219.5 |
| hypothetical protein | CKY39_RS13065 | Not Available | Positive | 2835168 - 2835674 | 18896.1 |
| hypothetical protein | CKY39_RS13070 | Not Available | Positive | 2835769 - 2836017 | 7654.1 |
| mbl fold metallo-hydrolase | CKY39_RS13075 | Not Available | Negative | 2836097 - 2836876 | 27878.0 |
| outer membrane protein assembly factor bamc | CKY39_RS13080 | Not Available | Negative | 2836882 - 2837961 | 39649.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CKY39_RS13085 | Not Available | Negative | 2838112 - 2838960 | 30361.8 |
| class i sam-dependent methyltransferase | CKY39_RS13090 | Not Available | Negative | 2839080 - 2839652 | 20058.0 |
| hypothetical protein | CKY39_RS33730 | Not Available | Negative | 2839696 - 2839839 | 5220.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
