Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CKY39_RS12840 | Not Available | Negative | 2796228 - 2797112 | 32386.1 |
| sulp family inorganic anion transporter | CKY39_RS12845 | Not Available | Negative | 2797144 - 2798874 | 60694.1 |
| duf2501 domain-containing protein | CKY39_RS12850 | Not Available | Negative | 2798936 - 2799388 | 15031.0 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CKY39_RS12855 | Not Available | Negative | 2799511 - 2800728 | 41588.6 |
| acyl carrier protein | CKY39_RS12860 | Not Available | Negative | 2800725 - 2800967 | 8757.39 |
| phosphatase pap2 family protein | CKY39_RS12865 | Not Available | Negative | 2801133 - 2801819 | 25128.2 |
| arac family transcriptional regulator | CKY39_RS12870 | Not Available | Negative | 2801885 - 2802685 | 29594.8 |
| mfs transporter | CKY39_RS12875 | Not Available | Positive | 2802867 - 2804117 | 43093.4 |
| sulfite exporter taue/safe family protein | CKY39_RS12880 | Not Available | Positive | 2804158 - 2804907 | 26027.1 |
| aec family transporter | CKY39_RS12895 | Not Available | Negative | 2805614 - 2806531 | 32351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
