Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CKY39_RS00175 | Not Available | Positive | 38568 - 39257 | 25004.2 |
| sensor histidine kinase | CKY39_RS00180 | Not Available | Positive | 39268 - 40629 | 50123.3 |
| gnat family n-acetyltransferase | CKY39_RS00185 | Not Available | Negative | 40660 - 41136 | 17717.2 |
| rida family protein | CKY39_RS00190 | Not Available | Negative | 41133 - 41618 | 16932.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00195 | Not Available | Negative | 41697 - 42799 | 39100.4 |
| acyclic terpene utilization atua family protein | CKY39_RS00200 | Not Available | Negative | 42886 - 44709 | 63468.9 |
| enoyl-coa hydratase-related protein | CKY39_RS00205 | Not Available | Negative | 44706 - 45434 | 26145.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00210 | Not Available | Negative | 45644 - 46251 | 20633.2 |
| duf1328 family protein | CKY39_RS00215 | Not Available | Positive | 46442 - 46627 | 6016.92 |
| transglutaminase-like domain-containing protein | CKY39_RS00220 | Not Available | Positive | 46645 - 47511 | 31556.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
