Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | CKY39_RS12790 | Not Available | Negative | 2788987 - 2789865 | 30593.8 |
| abc transporter atp-binding protein | CKY39_RS12795 | Not Available | Negative | 2789865 - 2790704 | 30374.0 |
| tetr/acrr family transcriptional regulator | CKY39_RS12800 | Not Available | Positive | 2790873 - 2791535 | 24203.4 |
| enoyl-coa hydratase/isomerase family protein | CKY39_RS12805 | Not Available | Positive | 2791532 - 2792323 | 27097.8 |
| acetyl-coa c-acyltransferase family protein | CKY39_RS12810 | Not Available | Positive | 2792366 - 2793550 | 40702.1 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | CKY39_RS12815 | Not Available | Positive | 2793567 - 2793974 | 15077.1 |
| hypothetical protein | CKY39_RS12820 | Not Available | Negative | 2793943 - 2794470 | 18395.8 |
| duf3299 domain-containing protein | CKY39_RS12825 | Not Available | Positive | 2794607 - 2795188 | 20433.6 |
| gnat family n-acetyltransferase | CKY39_RS12830 | Not Available | Negative | 2795172 - 2795678 | 18282.0 |
| gfa family protein | CKY39_RS12835 | Not Available | Positive | 2795812 - 2796225 | 14647.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
