Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase | CKY39_RS12745 | Not Available | Negative | 2777372 - 2778208 | 28442.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS12750 | Not Available | Negative | 2778325 - 2779305 | 34466.0 |
| atp-dependent chaperone clpb | CKY39_RS12755 | Not Available | Positive | 2779462 - 2782083 | 95966.5 |
| hypothetical protein | CKY39_RS12760 | Not Available | Positive | 2782093 - 2782422 | 11820.5 |
| hypothetical protein | CKY39_RS12765 | Not Available | Positive | 2783020 - 2783796 | 26763.3 |
| hypothetical protein | CKY39_RS34730 | Not Available | Positive | 2783938 - 2784066 | 4559.56 |
| amp-dependent synthetase/ligase | CKY39_RS12770 | Not Available | Negative | 2784078 - 2785892 | 66300.4 |
| abc transporter atp-binding protein | CKY39_RS12775 | Not Available | Negative | 2785904 - 2786737 | 30034.3 |
| abc transporter substrate-binding protein | CKY39_RS12780 | Not Available | Negative | 2786746 - 2787891 | 40927.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS12785 | Not Available | Negative | 2787948 - 2788984 | 36334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
