Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | CKY39_RS12695 | Not Available | Positive | 2767564 - 2768796 | 45453.7 |
| duf1176 domain-containing protein | CKY39_RS12700 | Not Available | Positive | 2768793 - 2769830 | 36169.1 |
| homoserine dehydrogenase | CKY39_RS12705 | Not Available | Positive | 2769845 - 2771167 | 46581.6 |
| threonine synthase | CKY39_RS12710 | Not Available | Positive | 2771164 - 2772579 | 51818.9 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | CKY39_RS12715 | Not Available | Positive | 2772596 - 2773141 | 20051.8 |
| gephyrin-like molybdotransferase glp | CKY39_RS12720 | Not Available | Positive | 2773134 - 2774423 | 44681.7 |
| moad/this family protein | CKY39_RS12725 | Not Available | Positive | 2774432 - 2774683 | 8766.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CKY39_RS12730 | Not Available | Negative | 2774670 - 2775569 | 31888.5 |
| hypothetical protein | CKY39_RS12735 | Not Available | Negative | 2775808 - 2776833 | 36216.3 |
| molybdenum cofactor biosynthesis protein moae | CKY39_RS12740 | Not Available | Positive | 2776870 - 2777355 | 17667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
