Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CKY39_RS12595 | Not Available | Positive | 2751272 - 2751658 | 14458.2 |
| heme/hemin abc transporter substrate-binding protein | CKY39_RS12600 | Not Available | Positive | 2751692 - 2752600 | 32012.6 |
| feccd family abc transporter permease | CKY39_RS12605 | Not Available | Positive | 2752597 - 2753634 | 35057.1 |
| heme abc transporter atp-binding protein | CKY39_RS12610 | Not Available | Positive | 2753631 - 2754431 | 28005.0 |
| pyruvate, water dikinase regulatory protein | CKY39_RS12615 | Not Available | Negative | 2754473 - 2755294 | 30843.1 |
| phosphoenolpyruvate synthase | CKY39_RS12620 | Not Available | Positive | 2755488 - 2757884 | 86595.6 |
| hypothetical protein | CKY39_RS12625 | Not Available | Positive | 2758098 - 2758556 | 16022.5 |
| 30s ribosomal protein s6 | CKY39_RS12630 | Not Available | Positive | 2758673 - 2759047 | 14217.1 |
| primosomal replication protein n | CKY39_RS12635 | Not Available | Positive | 2759052 - 2759366 | 10981.2 |
| 30s ribosomal protein s18 | CKY39_RS12640 | Not Available | Positive | 2759388 - 2759669 | 11040.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
