Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase subunit alpha | CKY39_RS12545 | Not Available | Negative | 2740211 - 2741575 | 48513.2 |
| fad:protein fmn transferase | CKY39_RS12550 | Not Available | Negative | 2741572 - 2742582 | 35577.0 |
| duf4198 domain-containing protein | CKY39_RS12555 | Not Available | Negative | 2742597 - 2743406 | 28620.0 |
| duf2271 domain-containing protein | CKY39_RS12560 | Not Available | Negative | 2743454 - 2743987 | 19219.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS12565 | Not Available | Negative | 2744053 - 2744699 | 23411.4 |
| bacterioferritin | CKY39_RS12570 | Not Available | Negative | 2744831 - 2745307 | 18176.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS12575 | Not Available | Positive | 2745567 - 2746129 | 20520.2 |
| alkyl hydroperoxide reductase subunit f | CKY39_RS12580 | Not Available | Positive | 2746219 - 2747775 | 55643.9 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | CKY39_RS12585 | Not Available | Positive | 2747936 - 2750152 | 81480.6 |
| hemin-degrading factor | CKY39_RS12590 | Not Available | Positive | 2750190 - 2751275 | 39541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
