Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | CKY39_RS12500 | Not Available | Negative | 2732688 - 2733389 | 24794.1 |
| glcg/hbps family heme-binding protein | CKY39_RS12505 | Not Available | Positive | 2733561 - 2733968 | 13797.6 |
| hemin uptake protein hemp | CKY39_RS12510 | Not Available | Negative | 2734152 - 2734364 | 7339.98 |
| exbd/tolr family protein | CKY39_RS12515 | Not Available | Negative | 2734469 - 2734882 | 15360.5 |
| mota/tolq/exbb proton channel family protein | CKY39_RS12520 | Not Available | Negative | 2734891 - 2735607 | 25419.8 |
| energy transducer tonb | CKY39_RS12525 | Not Available | Negative | 2735630 - 2736322 | 24051.3 |
| bacterioferritin-associated ferredoxin | CKY39_RS12530 | Not Available | Negative | 2736424 - 2736696 | 9680.59 |
| fe2+-dependent dioxygenase | CKY39_RS12535 | Not Available | Negative | 2736808 - 2737488 | 25204.0 |
| catecholate siderophore receptor fiu | CKY39_RS12540 | Not Available | Negative | 2737591 - 2739972 | 84868.5 |
| hypothetical protein | CKY39_RS33255 | Not Available | Positive | 2739971 - 2740192 | 7974.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
