Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS12450 | Not Available | Negative | 2724725 - 2725057 | 12934.6 |
| glsb/yeaq/ymge family stress response membrane protein | CKY39_RS12455 | Not Available | Negative | 2725152 - 2725400 | 8398.64 |
| Trna-his | Not Available | Not Available | Positive | 2725678 - 2725753 | Not Available |
| h-ns family nucleoid-associated regulatory protein | CKY39_RS12465 | Not Available | Positive | 2726039 - 2726386 | 12380.6 |
| nadph:quinone oxidoreductase family protein | CKY39_RS12470 | Not Available | Negative | 2726484 - 2727470 | 34339.8 |
| 5'/3'-nucleotidase sure | CKY39_RS12475 | Not Available | Positive | 2727598 - 2728356 | 27023.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS12480 | Not Available | Positive | 2728433 - 2729136 | 24660.3 |
| peptidoglycan dd-metalloendopeptidase family protein | CKY39_RS12485 | Not Available | Positive | 2729148 - 2730059 | 31372.0 |
| sigma-70 family rna polymerase sigma factor | CKY39_RS12490 | Not Available | Positive | 2730064 - 2731137 | 38913.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CKY39_RS12495 | Not Available | Positive | 2731205 - 2732641 | 52902.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
