Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase crec | CKY39_RS00125 | Not Available | Negative | 28472 - 29914 | 54085.2 |
| two-component system response regulator creb | CKY39_RS00130 | Not Available | Negative | 29911 - 30705 | 29232.1 |
| ycjf family protein | CKY39_RS00135 | Not Available | Positive | 31275 - 32225 | 33268.1 |
| cu(i)-responsive transcriptional regulator | CKY39_RS00140 | Not Available | Negative | 32343 - 32762 | 15533.6 |
| heavy-metal-associated domain-containing protein | CKY39_RS00145 | Not Available | Negative | 32762 - 32956 | 6953.13 |
| heavy metal translocating p-type atpase | CKY39_RS00150 | Not Available | Positive | 33118 - 35382 | 78554.8 |
| gnat family n-acetyltransferase | CKY39_RS00155 | Not Available | Negative | 35395 - 35883 | 18283.9 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | CKY39_RS00160 | Not Available | Negative | 35978 - 37270 | 43386.5 |
| phosphopantetheine-binding protein | CKY39_RS00165 | Not Available | Negative | 37267 - 37554 | 10135.0 |
| alpha/beta hydrolase | CKY39_RS00170 | Not Available | Negative | 37572 - 38453 | 32903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
