Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | CKY39_RS12035 | Not Available | Positive | 2654310 - 2655722 | 49950.9 |
| 2-hydroxyacid dehydrogenase | CKY39_RS12040 | Not Available | Positive | 2655757 - 2656749 | 35084.3 |
| dna recombination protein rmuc | CKY39_RS12045 | Not Available | Positive | 2656785 - 2658155 | 50516.4 |
| mfs transporter | CKY39_RS12050 | Not Available | Positive | 2658152 - 2659315 | 40615.2 |
| mfs transporter | CKY39_RS12055 | Not Available | Positive | 2659425 - 2660963 | 52806.4 |
| hypothetical protein | CKY39_RS12060 | Not Available | Positive | 2661046 - 2661492 | 16508.7 |
| tetr/acrr family transcriptional regulator | CKY39_RS12065 | Not Available | Positive | 2661495 - 2662145 | 23837.3 |
| tigr00730 family rossman fold protein | CKY39_RS12070 | Not Available | Negative | 2662155 - 2663018 | 32221.6 |
| elongation factor p | CKY39_RS12075 | Not Available | Negative | 2663141 - 2663695 | 20662.8 |
| elongation factor p maturation arginine rhamnosyltransferase earp | CKY39_RS12080 | Not Available | Negative | 2663849 - 2664937 | 39846.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
