Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS34255 | Not Available | Positive | 2645629 - 2645910 | 9737.6 |
| dna primase | CKY39_RS11990 | Not Available | Negative | 2646092 - 2648119 | 73941.5 |
| yihy/virulence factor brkb family protein | CKY39_RS11995 | Not Available | Positive | 2648194 - 2649141 | 34464.0 |
| 3-hydroxyacyl-coa dehydrogenase | CKY39_RS12000 | Not Available | Negative | 2649089 - 2649847 | 25760.4 |
| phasin family protein | CKY39_RS12005 | Not Available | Negative | 2649978 - 2650529 | 18852.1 |
| histone deacetylase | CKY39_RS12010 | Not Available | Positive | 2650714 - 2651640 | 34194.6 |
| acyl-coa thioesterase | CKY39_RS12015 | Not Available | Positive | 2651637 - 2652098 | 16806.8 |
| hypothetical protein | CKY39_RS12020 | Not Available | Negative | 2652156 - 2652566 | 14950.8 |
| csbd family protein | CKY39_RS12025 | Not Available | Negative | 2652634 - 2652867 | 9099.55 |
| nicotinate phosphoribosyltransferase | CKY39_RS12030 | Not Available | Positive | 2653053 - 2654273 | 46631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
