Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quinol monooxygenase | CKY39_RS11940 | Not Available | Positive | 2634668 - 2634967 | 11186.4 |
| dsba family protein | CKY39_RS11945 | Not Available | Negative | 2634964 - 2635692 | 25505.1 |
| mbl fold metallo-hydrolase | CKY39_RS11950 | Not Available | Negative | 2635680 - 2636579 | 31949.6 |
| lysr family transcriptional regulator | CKY39_RS11955 | Not Available | Negative | 2636699 - 2637616 | 33220.2 |
| hydroxymethylglutaryl-coa lyase | CKY39_RS11960 | Not Available | Positive | 2637717 - 2638664 | 33295.2 |
| caib/baif coa transferase family protein | CKY39_RS11965 | Not Available | Positive | 2638661 - 2639860 | 42984.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11970 | Not Available | Positive | 2639900 - 2640898 | 34275.9 |
| hpp family protein | CKY39_RS11975 | Not Available | Negative | 2640947 - 2642074 | 40792.9 |
| multidrug effflux mfs transporter | CKY39_RS11980 | Not Available | Negative | 2642087 - 2643325 | 44906.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS11985 | Not Available | Negative | 2643433 - 2645645 | 81254.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
