Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | CKY39_RS11890 | Not Available | Negative | 2623625 - 2624746 | 41912.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CKY39_RS11895 | Not Available | Positive | 2624892 - 2626001 | 41481.0 |
| gntr family transcriptional regulator | CKY39_RS11900 | Not Available | Positive | 2626001 - 2626774 | 27758.5 |
| pdr/vanb family oxidoreductase | CKY39_RS11905 | Not Available | Positive | 2626820 - 2627809 | 35192.2 |
| abc transporter substrate-binding protein | CKY39_RS11910 | Not Available | Positive | 2627965 - 2629149 | 42136.0 |
| branched-chain amino acid abc transporter permease | CKY39_RS11915 | Not Available | Positive | 2629486 - 2630358 | 30926.2 |
| branched-chain amino acid abc transporter permease | CKY39_RS11920 | Not Available | Positive | 2630360 - 2631346 | 34942.9 |
| abc transporter atp-binding protein | CKY39_RS11925 | Not Available | Positive | 2631343 - 2632107 | 27579.6 |
| abc transporter atp-binding protein | CKY39_RS11930 | Not Available | Positive | 2632100 - 2632807 | 25322.8 |
| tannase/feruloyl esterase family alpha/beta hydrolase | CKY39_RS11935 | Not Available | Positive | 2632882 - 2634549 | 58569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
