Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CKY39_RS11840 | Not Available | Positive | 2610709 - 2611167 | 15688.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11845 | Not Available | Positive | 2611182 - 2612168 | 34907.9 |
| glucarate dehydratase | CKY39_RS11850 | Not Available | Positive | 2612244 - 2613545 | 47472.9 |
| smp-30/gluconolactonase/lre family protein | CKY39_RS11855 | Not Available | Positive | 2613595 - 2614692 | 40154.4 |
| aldehyde dehydrogenase family protein | CKY39_RS11860 | Not Available | Positive | 2614746 - 2616182 | 50530.5 |
| glycine betaine abc transporter substrate-binding protein | CKY39_RS11865 | Not Available | Negative | 2616500 - 2618041 | 54379.1 |
| rok family protein | CKY39_RS11870 | Not Available | Positive | 2618152 - 2619210 | 38981.1 |
| ig-like domain-containing protein | CKY39_RS11875 | Not Available | Negative | 2619221 - 2620984 | 61928.9 |
| phospholipase d-like domain-containing protein | CKY39_RS11880 | Not Available | Negative | 2621524 - 2622903 | 50785.4 |
| glutathione s-transferase family protein | CKY39_RS11885 | Not Available | Negative | 2622929 - 2623597 | 24755.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
