Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS11790 | Not Available | Negative | 2600583 - 2601344 | 26494.8 |
| galactarate dehydratase | CKY39_RS11795 | Not Available | Negative | 2601371 - 2602942 | 55980.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS11800 | Not Available | Negative | 2602965 - 2604259 | 45078.7 |
| trap transporter small permease | CKY39_RS11805 | Not Available | Negative | 2604268 - 2604756 | 18024.6 |
| trap transporter substrate-binding protein | CKY39_RS11810 | Not Available | Negative | 2604853 - 2605830 | 36032.6 |
| smp-30/gluconolactonase/lre family protein | CKY39_RS11815 | Not Available | Negative | 2605881 - 2606771 | 31655.5 |
| nad-dependent epimerase/dehydratase family protein | CKY39_RS11820 | Not Available | Negative | 2606786 - 2607571 | 28621.8 |
| fadr/gntr family transcriptional regulator | CKY39_RS11825 | Not Available | Positive | 2607719 - 2608579 | 30722.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11830 | Not Available | Positive | 2608703 - 2609692 | 34657.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | CKY39_RS11835 | Not Available | Positive | 2609745 - 2610656 | 32522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
