Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeah/yhbh family protein | CKY39_RS11735 | Not Available | Negative | 2588249 - 2589541 | 49241.6 |
| prka family serine protein kinase | CKY39_RS11740 | Not Available | Negative | 2589623 - 2591545 | 73264.1 |
| molecular chaperone dnaj | CKY39_RS11745 | Not Available | Negative | 2592202 - 2593341 | 40906.2 |
| molecular chaperone dnak | CKY39_RS11750 | Not Available | Negative | 2593442 - 2595382 | 69329.5 |
| nucleotide exchange factor grpe | CKY39_RS11755 | Not Available | Negative | 2595497 - 2596033 | 19045.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CKY39_RS11760 | Not Available | Negative | 2596293 - 2596643 | 12194.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS11765 | Not Available | Negative | 2596857 - 2597159 | 11125.4 |
| archaetidylserine decarboxylase | CKY39_RS11770 | Not Available | Negative | 2597349 - 2598194 | 30868.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11780 | Not Available | Negative | 2598528 - 2599520 | 33955.1 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11785 | Not Available | Negative | 2599547 - 2600527 | 34549.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
