Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CKY39_RS11685 | Not Available | Negative | 2579146 - 2579649 | 18973.9 |
| s-formylglutathione hydrolase | CKY39_RS11690 | Not Available | Negative | 2579687 - 2580565 | 31686.7 |
| alpha/beta fold hydrolase | CKY39_RS11695 | Not Available | Negative | 2580562 - 2581491 | 33822.1 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | CKY39_RS11700 | Not Available | Negative | 2581511 - 2582617 | 39597.0 |
| glutathione s-transferase family protein | CKY39_RS11705 | Not Available | Negative | 2582670 - 2583320 | 24139.9 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CKY39_RS11710 | Not Available | Negative | 2583317 - 2584162 | 31504.3 |
| rieske (2fe-2s) protein | CKY39_RS11715 | Not Available | Negative | 2584182 - 2584856 | 23489.6 |
| lysr family transcriptional regulator | CKY39_RS11720 | Not Available | Positive | 2585027 - 2586022 | 35974.6 |
| type ii 3-dehydroquinate dehydratase | CKY39_RS11725 | Not Available | Positive | 2586070 - 2586510 | 15784.2 |
| spovr family protein | CKY39_RS11730 | Not Available | Negative | 2586678 - 2588252 | 61220.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
