Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CKY39_RS11585 | Not Available | Positive | 2561706 - 2562515 | 29080.3 |
| gluconokinase | CKY39_RS11590 | Not Available | Positive | 2562629 - 2563138 | 17555.2 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | CKY39_RS11595 | Not Available | Negative | 2563155 - 2564576 | 51703.0 |
| helix-turn-helix domain-containing protein | CKY39_RS11600 | Not Available | Positive | 2564705 - 2565697 | 35081.9 |
| sdr family oxidoreductase | CKY39_RS11605 | Not Available | Negative | 2565705 - 2566490 | 26460.7 |
| cysteine hydrolase family protein | CKY39_RS11610 | Not Available | Negative | 2566487 - 2567080 | 20785.7 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CKY39_RS11615 | Not Available | Negative | 2567077 - 2567565 | 19100.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CKY39_RS11620 | Not Available | Negative | 2567562 - 2568929 | 50262.5 |
| pdr/vanb family oxidoreductase | CKY39_RS11625 | Not Available | Negative | 2568953 - 2569918 | 33637.4 |
| dienelactone hydrolase family protein | CKY39_RS11630 | Not Available | Negative | 2569915 - 2571177 | 45616.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
