Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | CKY39_RS00075 | Not Available | Negative | 15794 - 16687 | 32473.5 |
| gnat family n-acetyltransferase | CKY39_RS00080 | Not Available | Negative | 16759 - 17523 | 27821.9 |
| biosynthetic peptidoglycan transglycosylase | CKY39_RS00085 | Not Available | Negative | 17526 - 18794 | 45804.3 |
| hypothetical protein | CKY39_RS00090 | Not Available | Negative | 18808 - 19377 | 21285.4 |
| exosortase q | CKY39_RS00095 | Not Available | Negative | 19358 - 20290 | 32599.6 |
| vit and vwa domain-containing protein | CKY39_RS00100 | Not Available | Negative | 20306 - 22366 | 74893.7 |
| cell envelope integrity protein cred | CKY39_RS00105 | Not Available | Positive | 22583 - 24070 | 53260.8 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | CKY39_RS00110 | Not Available | Positive | 24067 - 25359 | 46365.2 |
| penicillin-binding protein 1a | CKY39_RS00115 | Not Available | Positive | 25370 - 27763 | 86509.3 |
| hypothetical protein | CKY39_RS00120 | Not Available | Positive | 27873 - 28478 | 22667.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
