Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | CKY39_RS11535 | Not Available | Positive | 2548804 - 2550138 | 50999.1 |
| phosphoribosyltransferase | CKY39_RS11540 | Not Available | Positive | 2550222 - 2550854 | 22671.4 |
| dopa 4,5-dioxygenase family protein | CKY39_RS11545 | Not Available | Negative | 2550851 - 2551198 | 13138.5 |
| duf4166 domain-containing protein | CKY39_RS11550 | Not Available | Negative | 2551206 - 2551823 | 23586.4 |
| polyketide cyclase | CKY39_RS11555 | Not Available | Negative | 2551820 - 2552860 | 38431.3 |
| sam-dependent methyltransferase | CKY39_RS11560 | Not Available | Negative | 2552892 - 2553836 | 34696.4 |
| thiol-disulfide oxidoreductase dcc family protein | CKY39_RS11565 | Not Available | Negative | 2553889 - 2554320 | 15263.7 |
| gbsr/marr family transcriptional regulator | CKY39_RS11570 | Not Available | Negative | 2554396 - 2554992 | 22450.0 |
| pa0069 family radical sam protein | CKY39_RS11575 | Not Available | Positive | 2555127 - 2556221 | 40624.7 |
| duf5801 repeats-in-toxin domain-containing protein | CKY39_RS11580 | Not Available | Negative | 2556314 - 2561419 | 171496.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
