Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase | CKY39_RS11485 | Not Available | Negative | 2538613 - 2539923 | 46404.2 |
| cbs domain-containing protein | CKY39_RS11490 | Not Available | Positive | 2540072 - 2540530 | 16980.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11495 | Not Available | Negative | 2540674 - 2541657 | 34114.6 |
| adenosine deaminase family protein | CKY39_RS11500 | Not Available | Negative | 2541666 - 2542778 | 41285.1 |
| lysr family transcriptional regulator | CKY39_RS11505 | Not Available | Positive | 2542864 - 2543766 | 32506.6 |
| gnat family n-acetyltransferase | CKY39_RS11510 | Not Available | Negative | 2543763 - 2544419 | 25292.4 |
| polyhydroxyalkanoate depolymerase | CKY39_RS11515 | Not Available | Negative | 2544867 - 2546087 | 45943.2 |
| glutathione s-transferase | CKY39_RS11520 | Not Available | Positive | 2546179 - 2546835 | 24018.4 |
| helix-turn-helix domain-containing protein | CKY39_RS11525 | Not Available | Negative | 2546959 - 2547672 | 26359.0 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11530 | Not Available | Positive | 2547805 - 2548770 | 33290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
