Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrile hydratase subunit alpha | CKY39_RS11435 | Not Available | Positive | 2531447 - 2532088 | 23566.7 |
| nitrile hydratase subunit beta | CKY39_RS11440 | Not Available | Positive | 2532085 - 2532750 | 24013.2 |
| nitrile hydratase accessory protein | CKY39_RS11445 | Not Available | Positive | 2532747 - 2533124 | 13710.0 |
| fad-binding oxidoreductase | CKY39_RS11450 | Not Available | Negative | 2533121 - 2534548 | 50787.8 |
| duf2069 domain-containing protein | CKY39_RS11455 | Not Available | Negative | 2534545 - 2534961 | 15074.9 |
| yihy family inner membrane protein | CKY39_RS11460 | Not Available | Positive | 2535028 - 2536239 | 44417.3 |
| mpo1-like protein | CKY39_RS11465 | Not Available | Negative | 2536261 - 2536611 | 13121.9 |
| thioredoxin family protein | CKY39_RS11470 | Not Available | Positive | 2536710 - 2537093 | 13722.5 |
| nad-dependent epimerase/dehydratase family protein | CKY39_RS11475 | Not Available | Positive | 2537115 - 2537780 | 24271.8 |
| alpha/beta fold hydrolase | CKY39_RS11480 | Not Available | Negative | 2537805 - 2538611 | 28485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
