Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | CKY39_RS11385 | Not Available | Positive | 2521717 - 2522736 | 36564.2 |
| hypothetical protein | CKY39_RS11390 | Not Available | Negative | 2522793 - 2523284 | 18361.2 |
| nadp-specific glutamate dehydrogenase | CKY39_RS11395 | Not Available | Positive | 2523519 - 2524862 | 48045.5 |
| hypothetical protein | CKY39_RS11400 | Not Available | Negative | 2524889 - 2525128 | 8843.77 |
| merr family transcriptional regulator | CKY39_RS11405 | Not Available | Negative | 2525184 - 2525678 | 18145.8 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | CKY39_RS11410 | Not Available | Positive | 2525748 - 2526989 | 44507.5 |
| phosphatidate phosphatase app1 family protein | CKY39_RS11415 | Not Available | Negative | 2527006 - 2528133 | 41739.8 |
| dihydrofolate reductase | CKY39_RS11420 | Not Available | Negative | 2528130 - 2528633 | 18347.8 |
| m48 family metallopeptidase | CKY39_RS11425 | Not Available | Negative | 2528659 - 2530524 | 68570.4 |
| thymidylate synthase | CKY39_RS11430 | Not Available | Negative | 2530571 - 2531410 | 31870.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
