Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline-quinone synthase pqqc | CKY39_RS11335 | Not Available | Positive | 2512927 - 2513604 | 25966.8 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | CKY39_RS11340 | Not Available | Positive | 2513601 - 2513870 | 10099.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | CKY39_RS11345 | Not Available | Positive | 2513815 - 2515026 | 44871.7 |
| alpha/beta fold hydrolase | CKY39_RS11350 | Not Available | Positive | 2515039 - 2515971 | 33360.2 |
| elwxxdgt repeat protein | CKY39_RS11355 | Not Available | Negative | 2515952 - 2517367 | 49586.3 |
| trap transporter large permease | CKY39_RS11360 | Not Available | Negative | 2517372 - 2518652 | 44624.1 |
| trap transporter small permease | CKY39_RS11365 | Not Available | Negative | 2518649 - 2519215 | 20362.5 |
| type ii 3-dehydroquinate dehydratase | CKY39_RS11370 | Not Available | Negative | 2519212 - 2519673 | 16442.9 |
| trap transporter substrate-binding protein | CKY39_RS11375 | Not Available | Negative | 2519710 - 2520693 | 35744.0 |
| iclr family transcriptional regulator | CKY39_RS11380 | Not Available | Positive | 2520890 - 2521672 | 27246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
