Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CKY39_RS11235 | Not Available | Positive | 2478656 - 2479375 | 25701.3 |
| abc transporter atp-binding protein | CKY39_RS11240 | Not Available | Positive | 2479372 - 2480088 | 25722.3 |
| abc transporter permease subunit | CKY39_RS34720 | Not Available | Positive | 2480081 - 2480368 | 10245.7 |
| branched-chain amino acid abc transporter permease | CKY39_RS11245 | Not Available | Positive | 2480257 - 2480940 | 23867.0 |
| sulfatase-like hydrolase/transferase | CKY39_RS11250 | Not Available | Positive | 2480950 - 2482545 | 59584.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11255 | Not Available | Positive | 2482594 - 2483568 | 33804.6 |
| branched-chain amino acid abc transporter permease | CKY39_RS11260 | Not Available | Positive | 2483574 - 2484611 | 36958.4 |
| intradiol ring-cleavage dioxygenase | CKY39_RS11265 | Not Available | Positive | 2484595 - 2485458 | 30946.7 |
| hypothetical protein | CKY39_RS11270 | Not Available | Positive | 2485531 - 2485764 | 8013.11 |
| response regulator transcription factor | CKY39_RS11275 | Not Available | Positive | 2485861 - 2486715 | 31484.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
