Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspl | CKY39_RS11190 | Not Available | Negative | 2470144 - 2470395 | 9241.32 |
| hypothetical protein | CKY39_RS11195 | Not Available | Negative | 2470408 - 2470653 | 8496.8 |
| hypothetical protein | CKY39_RS33725 | Not Available | Negative | 2470663 - 2470824 | 5433.71 |
| lysr family transcriptional regulator | CKY39_RS11200 | Not Available | Positive | 2471029 - 2471979 | 34993.4 |
| hydroxyquinol 1,2-dioxygenase | CKY39_RS11205 | Not Available | Positive | 2472138 - 2472647 | 18930.5 |
| hypothetical protein | CKY39_RS11210 | Not Available | Positive | 2472670 - 2473677 | 37679.3 |
| aldehyde dehydrogenase family protein | CKY39_RS11215 | Not Available | Positive | 2473773 - 2475236 | 52478.9 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS11220 | Not Available | Positive | 2475277 - 2476251 | 34639.9 |
| maleylacetate reductase | CKY39_RS11225 | Not Available | Positive | 2476273 - 2477340 | 37029.8 |
| abc transporter substrate-binding protein | CKY39_RS11230 | Not Available | Positive | 2477390 - 2478643 | 44529.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
