Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS00025 | Not Available | Positive | 6988 - 7512 | 18205.1 |
| hypothetical protein | CKY39_RS00030 | Not Available | Positive | 7625 - 8137 | 17737.3 |
| metallophosphoesterase | CKY39_RS00035 | Not Available | Positive | 8322 - 9518 | 42926.4 |
| polyhydroxyalkanoate granule-associated phasin | CKY39_RS00040 | Not Available | Negative | 9531 - 10031 | 17575.0 |
| lysylphosphatidylglycerol synthase domain-containing protein | CKY39_RS00045 | Not Available | Negative | 10149 - 11126 | 35168.7 |
| cardiolipin synthase clsb | CKY39_RS00050 | Not Available | Negative | 11123 - 12400 | 48124.0 |
| endonuclease/exonuclease/phosphatase family protein | CKY39_RS00055 | Not Available | Negative | 12415 - 13212 | 29306.3 |
| serine/threonine protein kinase | CKY39_RS00060 | Not Available | Positive | 13423 - 13797 | 13042.5 |
| spy/cpxp family protein refolding chaperone | CKY39_RS00065 | Not Available | Negative | 13906 - 14484 | 20644.4 |
| flavodoxin family protein | CKY39_RS00070 | Not Available | Negative | 14634 - 15707 | 39809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
