Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase family protein | CKY39_RS10990 | Not Available | Positive | 2428199 - 2428516 | 11928.2 |
| fadr/gntr family transcriptional regulator | CKY39_RS10995 | Not Available | Negative | 2428521 - 2429228 | 25171.0 |
| mfs transporter | CKY39_RS11000 | Not Available | Negative | 2429303 - 2430628 | 47689.6 |
| ureidoglycolate lyase | CKY39_RS11005 | Not Available | Positive | 2430891 - 2431370 | 17091.6 |
| hypothetical protein | CKY39_RS11010 | Not Available | Positive | 2431511 - 2431873 | 12509.9 |
| hypothetical protein | CKY39_RS11015 | Not Available | Negative | 2432024 - 2432230 | 7504.1 |
| methyltransferase regulatory domain-containing protein | CKY39_RS11020 | Not Available | Positive | 2432376 - 2433971 | 58266.3 |
| gamma-glutamyltransferase | CKY39_RS11025 | Not Available | Positive | 2434034 - 2435770 | 61118.2 |
| pseudouridine synthase | CKY39_RS11030 | Not Available | Positive | 2435832 - 2436572 | 26834.4 |
| ynce family protein | CKY39_RS11035 | Not Available | Positive | 2436678 - 2437691 | 36674.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
