Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase family protein | CKY39_RS34220 | Not Available | Negative | 2417929 - 2418495 | 19663.8 |
| hypothetical protein | CKY39_RS10950 | Not Available | Negative | 2418992 - 2419438 | 14937.5 |
| luxr c-terminal-related transcriptional regulator | CKY39_RS10955 | Not Available | Negative | 2419453 - 2420226 | 28604.7 |
| response regulator | CKY39_RS10960 | Not Available | Negative | 2421086 - 2421772 | 25052.2 |
| sensor histidine kinase | CKY39_RS34225 | Not Available | Negative | 2421810 - 2422733 | 33430.5 |
| hypothetical protein | CKY39_RS34230 | Not Available | Negative | 2422733 - 2423491 | 27419.5 |
| hypothetical protein | CKY39_RS10970 | Not Available | Negative | 2423869 - 2424339 | 17288.0 |
| duf5666 domain-containing protein | CKY39_RS10975 | Not Available | Negative | 2424718 - 2426064 | 43678.6 |
| duf6502 family protein | CKY39_RS10980 | Not Available | Negative | 2426061 - 2426894 | 30797.9 |
| alpha/beta fold hydrolase | CKY39_RS10985 | Not Available | Positive | 2427249 - 2428202 | 35776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
