Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CKY39_RS10905 | Not Available | Negative | 2396491 - 2399202 | 95848.1 |
| response regulator transcription factor | CKY39_RS10910 | Not Available | Negative | 2399419 - 2400075 | 24196.5 |
| tolc family outer membrane protein | CKY39_RS10915 | Not Available | Negative | 2400154 - 2401515 | 48147.1 |
| sco family protein | CKY39_RS10920 | Not Available | Negative | 2401602 - 2402255 | 23952.0 |
| multicopper oxidase family protein | CKY39_RS10925 | Not Available | Negative | 2402285 - 2403634 | 50156.9 |
| twin-arginine translocation signal domain-containing protein | CKY39_RS33930 | Not Available | Negative | 2403631 - 2404068 | 15485.5 |
| hlyd family type i secretion periplasmic adaptor subunit | CKY39_RS10930 | Not Available | Negative | 2404103 - 2405440 | 49248.6 |
| type i secretion system permease/atpase | CKY39_RS10935 | Not Available | Negative | 2405477 - 2407159 | 60709.0 |
| hypothetical protein | CKY39_RS10940 | Not Available | Negative | 2407191 - 2407460 | 9668.55 |
| peroxidase family protein | CKY39_RS10945 | Not Available | Negative | 2407502 - 2417899 | 357868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
