Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | CKY39_RS10855 | Not Available | Negative | 2384971 - 2387331 | 86411.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10860 | Not Available | Negative | 2387386 - 2388333 | 33863.0 |
| acyl-coa dehydrogenase family protein | CKY39_RS10865 | Not Available | Negative | 2388614 - 2389771 | 42803.3 |
| enoyl-coa hydratase-related protein | CKY39_RS10870 | Not Available | Negative | 2389794 - 2390597 | 27738.2 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS10875 | Not Available | Negative | 2390601 - 2391431 | 28898.8 |
| maoc family dehydratase | CKY39_RS10880 | Not Available | Negative | 2391458 - 2391877 | 15205.2 |
| maoc family dehydratase n-terminal domain-containing protein | CKY39_RS10885 | Not Available | Negative | 2391889 - 2392329 | 16041.1 |
| lipid-transfer protein | CKY39_RS10890 | Not Available | Negative | 2392359 - 2393543 | 41465.6 |
| long-chain-fatty-acid--coa ligase | CKY39_RS10895 | Not Available | Negative | 2393588 - 2395159 | 56714.4 |
| arac family transcriptional regulator | CKY39_RS10900 | Not Available | Positive | 2395383 - 2396393 | 36805.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
