Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10805 | Not Available | Negative | 2374190 - 2375128 | 32321.1 |
| lysr family transcriptional regulator | CKY39_RS10810 | Not Available | Positive | 2375394 - 2376299 | 33475.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10815 | Not Available | Negative | 2376321 - 2377343 | 35474.5 |
| hypothetical protein | CKY39_RS10820 | Not Available | Negative | 2377429 - 2378112 | 22818.6 |
| acid phosphatase | CKY39_RS10825 | Not Available | Negative | 2378230 - 2379078 | 29133.7 |
| porin | CKY39_RS10830 | Not Available | Negative | 2379101 - 2380429 | 46046.1 |
| crp/fnr family transcriptional regulator | CKY39_RS10835 | Not Available | Positive | 2380872 - 2381531 | 24673.9 |
| arac family transcriptional regulator | CKY39_RS10840 | Not Available | Negative | 2381536 - 2382582 | 38428.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10845 | Not Available | Negative | 2382604 - 2383599 | 35082.7 |
| duf1254 domain-containing protein | CKY39_RS10850 | Not Available | Negative | 2383643 - 2384974 | 48249.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
