Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | CKY39_RS10705 | Not Available | Positive | 2351382 - 2352122 | 27657.1 |
| amp-binding protein | CKY39_RS10710 | Not Available | Positive | 2352119 - 2353771 | 59235.4 |
| maoc family dehydratase | CKY39_RS10715 | Not Available | Positive | 2353764 - 2354210 | 15495.5 |
| tannase/feruloyl esterase family alpha/beta hydrolase | CKY39_RS10720 | Not Available | Positive | 2354269 - 2355861 | 56237.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10725 | Not Available | Negative | 2356614 - 2357534 | 32146.8 |
| arylsulfatase | CKY39_RS10730 | Not Available | Negative | 2357647 - 2358966 | 49064.1 |
| lysr family transcriptional regulator | CKY39_RS10735 | Not Available | Positive | 2359049 - 2359975 | 33306.5 |
| fad-binding oxidoreductase | CKY39_RS10740 | Not Available | Negative | 2359998 - 2361368 | 49546.1 |
| abc transporter permease | CKY39_RS10745 | Not Available | Negative | 2361377 - 2362195 | 29349.1 |
| abc transporter atp-binding protein | CKY39_RS10750 | Not Available | Negative | 2362192 - 2363022 | 30289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
