Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS34215 | Not Available | Negative | 2328014 - 2328751 | 25803.4 |
| lysr family transcriptional regulator | CKY39_RS10610 | Not Available | Positive | 2328868 - 2329803 | 34768.6 |
| hypothetical protein | CKY39_RS33720 | Not Available | Negative | 2330129 - 2330329 | 7095.96 |
| duf4148 domain-containing protein | CKY39_RS10620 | Not Available | Positive | 2331275 - 2331628 | 12350.7 |
| mate family efflux transporter | CKY39_RS10625 | Not Available | Positive | 2331736 - 2333139 | 47459.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS10630 | Not Available | Negative | 2333304 - 2334765 | 51070.9 |
| tetr/acrr family transcriptional regulator | CKY39_RS10635 | Not Available | Positive | 2334862 - 2335479 | 22829.5 |
| efflux rnd transporter periplasmic adaptor subunit | CKY39_RS10640 | Not Available | Positive | 2335564 - 2336679 | 38766.1 |
| efflux rnd transporter permease subunit | CKY39_RS10645 | Not Available | Positive | 2336676 - 2339753 | 111303.0 |
| oxidoreductase | CKY39_RS10650 | Not Available | Positive | 2339794 - 2340600 | 28825.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
