Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS33590 | Not Available | Positive | 6787320 - 6787541 | 7894.41 |
| hypothetical protein | CKY39_RS31395 | Not Available | Positive | 6787556 - 6787822 | 9999.88 |
| Hypothetical protein | CKY39_RS31400 | Not Available | Positive | 6787852 - 6788535 | 24276.7 |
| hypothetical protein | CKY39_RS31405 | Not Available | Positive | 6788539 - 6788850 | 11026.4 |
| hypothetical protein | CKY39_RS31410 | Not Available | Positive | 6788847 - 6789299 | 15556.7 |
| Dna cytosine methyltransferase | CKY39_RS31415 | Not Available | Positive | 6789391 - 6791115 | 62025.5 |
| chromosomal replication initiator protein dnaa | CKY39_RS00005 | Not Available | Positive | 1 - 1380 | 51577.3 |
| dna polymerase iii subunit beta | CKY39_RS00010 | Not Available | Positive | 1470 - 2576 | 40401.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CKY39_RS00015 | Not Available | Positive | 2710 - 5331 | 95813.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00020 | Not Available | Negative | 5417 - 6579 | 41200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
