Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CKY39_RS10510 | Not Available | Positive | 2314302 - 2314631 | 12065.3 |
| sdr family oxidoreductase | CKY39_RS10515 | Not Available | Positive | 2314628 - 2315410 | 26566.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34845 | Not Available | Positive | 2315677 - 2316455 | 27509.7 |
| hemerythrin domain-containing protein | CKY39_RS10530 | Not Available | Negative | 2317315 - 2317803 | 18332.8 |
| hypothetical protein | CKY39_RS10535 | Not Available | Positive | 2318037 - 2318255 | 8034.91 |
| ester cyclase | CKY39_RS10540 | Not Available | Negative | 2318398 - 2318835 | 16270.2 |
| voc family protein | CKY39_RS10545 | Not Available | Negative | 2318877 - 2319431 | 20498.3 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS10550 | Not Available | Negative | 2319455 - 2320222 | 26339.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10555 | Not Available | Negative | 2320215 - 2321186 | 33698.8 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS10560 | Not Available | Negative | 2321224 - 2322006 | 27972.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
