Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CKY39_RS10455 | Not Available | Positive | 2298923 - 2299609 | 24337.5 |
| atp-binding protein | CKY39_RS10460 | Not Available | Positive | 2299597 - 2301501 | 69366.3 |
| espr-type extended signal peptide-containing protein | CKY39_RS10465 | Not Available | Positive | 2301861 - 2302538 | 22051.1 |
| autotransporter-associated beta strand repeat-containing protein | CKY39_RS10470 | Not Available | Positive | 2302715 - 2306086 | 109014.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | CKY39_RS34195 | Not Available | Positive | 2305990 - 2309199 | 106352.0 |
| hypothetical protein | CKY39_RS10480 | Not Available | Positive | 2309459 - 2309689 | 8900.51 |
| hypothetical protein | CKY39_RS10485 | Not Available | Negative | 2310097 - 2310381 | 10914.1 |
| hypothetical protein | CKY39_RS10490 | Not Available | Positive | 2310481 - 2310930 | 16210.7 |
| is1182 family transposase | CKY39_RS10500 | Not Available | Negative | 2311430 - 2312866 | 54403.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS10505 | Not Available | Negative | 2313304 - 2314202 | 31674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
