Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | CKY39_RS10405 | Not Available | Negative | 2288944 - 2289879 | 33914.1 |
| ynce family protein | CKY39_RS10410 | Not Available | Negative | 2289887 - 2291068 | 40404.2 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10415 | Not Available | Negative | 2291084 - 2292055 | 33804.9 |
| aconitase x swivel domain-containing protein | CKY39_RS10420 | Not Available | Negative | 2292239 - 2292727 | 16822.3 |
| aconitase x | CKY39_RS10425 | Not Available | Negative | 2292733 - 2293974 | 44119.8 |
| lysr family transcriptional regulator | CKY39_RS10430 | Not Available | Positive | 2294267 - 2295073 | 30122.8 |
| marr family winged helix-turn-helix transcriptional regulator | CKY39_RS10435 | Not Available | Negative | 2295286 - 2295702 | 15483.7 |
| tripartite tricarboxylate transporter tctb family protein | CKY39_RS10440 | Not Available | Positive | 2295955 - 2296443 | 16962.7 |
| tripartite tricarboxylate transporter permease | CKY39_RS10445 | Not Available | Positive | 2296460 - 2297977 | 52969.4 |
| lysr substrate-binding domain-containing protein | CKY39_RS10450 | Not Available | Positive | 2298297 - 2298809 | 18739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
