Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | CKY39_RS10355 | Not Available | Negative | 2279095 - 2279760 | 23700.5 |
| lysr family transcriptional regulator | CKY39_RS10360 | Not Available | Positive | 2279866 - 2280774 | 32732.2 |
| lysr family transcriptional regulator | CKY39_RS10365 | Not Available | Negative | 2280784 - 2281716 | 32944.3 |
| thiamine pyrophosphate-binding protein | CKY39_RS10370 | Not Available | Positive | 2281821 - 2282357 | 19212.0 |
| thiamine pyrophosphate-dependent enzyme | CKY39_RS10375 | Not Available | Positive | 2282357 - 2282953 | 20835.1 |
| aldehyde dehydrogenase | CKY39_RS10380 | Not Available | Positive | 2282992 - 2284470 | 53180.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10385 | Not Available | Positive | 2284508 - 2285503 | 33874.2 |
| fad-binding oxidoreductase | CKY39_RS10390 | Not Available | Positive | 2285533 - 2286978 | 52006.6 |
| acyl-coa dehydrogenase family protein | CKY39_RS10395 | Not Available | Positive | 2287054 - 2288214 | 43142.5 |
| alpha/beta hydrolase | CKY39_RS10400 | Not Available | Positive | 2288326 - 2288922 | 21045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
