Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpb | CKY39_RS10305 | Not Available | Positive | 2270933 - 2271556 | 22253.1 |
| biotin-dependent carboxyltransferase family protein | CKY39_RS10310 | Not Available | Positive | 2271553 - 2272575 | 36357.0 |
| lamb/ycsf family protein | CKY39_RS10315 | Not Available | Positive | 2272572 - 2273348 | 26954.5 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | CKY39_RS10320 | Not Available | Negative | 2273362 - 2274000 | 22237.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS10325 | Not Available | Negative | 2274047 - 2275027 | 34113.4 |
| rraa family protein | CKY39_RS10330 | Not Available | Negative | 2275069 - 2275758 | 24629.5 |
| lysr family transcriptional regulator | CKY39_RS10335 | Not Available | Positive | 2275852 - 2276748 | 32688.8 |
| hypothetical protein | CKY39_RS33225 | Not Available | Negative | 2276775 - 2277176 | 15195.0 |
| pyridoxal phosphate-dependent aminotransferase | CKY39_RS10345 | Not Available | Negative | 2277207 - 2278427 | 43824.4 |
| rraa family protein | CKY39_RS10350 | Not Available | Negative | 2278430 - 2279098 | 23507.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
